Transcript: lnc-OR2A1-1:3

Basic information

LNCipedia transcript ID: lnc-OR2A1-1:3 
LNCipedia gene ID: lnc-OR2A1-1
Location (hg19): chr7:143892414-144009499
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 946 bp
Exons: 5
Sources: Refseq - Dec 2014
Alternative transcript names: NR_126023
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 69.8823 coding 
CPAT coding probability 2.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-OR2A1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTAGE4-1:10
4.0 lnc-OR2A1-1:3
4.1 lnc-OR2A1-1:3
5.0 lnc-OR2A1-1:3
5.1 lnc-ADCK2-56:4
5.2 lnc-OR2A1-1:3