Transcript: lnc-OR2D2-3:1

Basic information

LNCipedia transcript ID: lnc-OR2D2-3:1 
LNCipedia gene ID: lnc-OR2D2-3
Ensembl Gene ID: ENSG00000283415
Ensembl Transcript ID: ENST00000637205
Location (hg19): chr11:6843173-6948108
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4822 bp
Exons: 4
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000637205.1
Alternative gene names: ENSG00000283415.1; RP11-413N10.3; AC087280.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.4023 non-coding 
CPAT coding probability 2.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR2D2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-OR2D2-3:1
5.0 lnc-OR2D2-3:1
5.1 lnc-CAVIN3-26:1
5.2 lnc-OR2D2-3:1