Transcript: lnc-OR4F16-15:5

Basic information

LNCipedia transcript ID: lnc-OR4F16-15:5 
LNCipedia gene ID: lnc-OR4F16-15
Location (hg19): chr1:667056-675259
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4860 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT000107
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 40.3683 non-coding 
CPAT coding probability 10.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F16-15:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR4F16-3:6
4.0 lnc-OR4F16-3:6
4.1 lnc-OR4F16-3:6
5.0 lnc-OR4F16-3:6
5.1 lnc-CLSTN1-173:5
5.2 lnc-OR4F16-15:5