Transcript: lnc-OR4F16-16:1

Basic information

LNCipedia transcript ID: lnc-OR4F16-16:1 
LNCipedia gene ID: lnc-OR4F16-16
Location (hg19): chr1:735352-742955
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 402 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT000141
Alternative gene names: FLJ22639


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.48 non-coding 
CPAT coding probability 3.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F16-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM138A-1:6
4.0 lnc-OR4F16-5:2
4.1 LINC00115:27
5.0 LINC00115:27
5.1 lnc-CLSTN1-170:1
5.2 lnc-OR4F16-16:1