Transcript: lnc-OR4F16-16:2

Basic information

LNCipedia transcript ID: lnc-OR4F16-16:2 
LNCipedia gene ID: lnc-OR4F16-16
Location (hg19): chr1:726122-735404
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 523 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT000138
Alternative gene names: FLJ22639


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.3514 non-coding 
CPAT coding probability 8.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F16-16:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM138A-1:8
4.0 lnc-OR4F16-5:4
4.1 LINC00115:29
5.0 LINC00115:29
5.1 lnc-CLSTN1-170:2
5.2 lnc-OR4F16-16:2