Transcript: lnc-OR4F17-6:2

Basic information

LNCipedia transcript ID: lnc-OR4F17-6:2 
LNCipedia gene ID: lnc-OR4F17-6
Ensembl Gene ID: ENSG00000282535
Ensembl Transcript ID: ENST00000633154
Location (hg19): chr19:176896-177913
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1018 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000633154.1
Alternative gene names: ENSG00000282535.1; AC092192.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.3722 non-coding 
CPAT coding probability 23.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F17-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-OR4F17-6:2
4.1 lnc-OR4F17-6:2
5.0 lnc-OR4F17-6:2
5.1 lnc-RPL36-191:1
5.2 lnc-OR4F17-6:2