Transcript: lnc-OR4F29-11:7

Basic information

LNCipedia transcript ID: lnc-OR4F29-11:7 
LNCipedia gene ID: lnc-OR4F29-11
Location (hg19): chr1:14778-16668
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 507 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT000005
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.0405 non-coding 
CPAT coding probability 6.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F29-11:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM138A-8:8
4.0 lnc-FAM138A-8:8
4.1 lnc-FAM138A-8:8
5.0 lnc-FAM138A-8:8
5.1 lnc-CLSTN1-185:7
5.2 lnc-OR4F29-11:7