Transcript: lnc-OR4N4-1:20

Basic information

LNCipedia transcript ID: lnc-OR4N4-1:20 
LNCipedia gene ID: lnc-OR4N4-1
Location (hg19): chr15:22408314-22431226
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 554 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT040728
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.2191 non-coding 
CPAT coding probability 0.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4N4-1:20 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR4N4-1:20
4.0 lnc-OR4N4-1:20
4.1 lnc-OR4N4-1:20
5.0 lnc-OR4N4-1:20
5.1 lnc-SNRPN-57:23
5.2 lnc-OR4N4-1:20