Transcript: lnc-OR4N4-1:23

Basic information

LNCipedia transcript ID: lnc-OR4N4-1:23 
LNCipedia gene ID: lnc-OR4N4-1
Location (hg19): chr15:22289617-22347852
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 560 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 90 - Aug 2017
Alternative transcript names: ENST00000611429.4; ENST00000638871.1
Alternative gene names: ENSG00000259176.5; RP11-69H14.6; ENSG00000284500.1; AC134980.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -62.5911 non-coding 
CPAT coding probability 6.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4N4-1:23 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-OR4N4-1:23
4.1 lnc-OR4N4-1:23
5.0 lnc-OR4N4-1:23
5.1 lnc-SNRPN-57:11
5.2 lnc-OR4N4-1:23