Transcript: lnc-OR8K1-1:1

Basic information

LNCipedia transcript ID: lnc-OR8K1-1:1 
LNCipedia gene ID: lnc-OR8K1-1
Location (hg19): chr11:56102618-56103544
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 927 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT021386
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 221.7124 coding 
CPAT coding probability 6.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-OR8K1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR8K1-1:1
4.0 lnc-OR8K1-1:1
4.1 lnc-OR8K1-1:1
5.0 lnc-OR8K1-1:1
5.1 lnc-OR5T3-2:1
5.2 lnc-OR8K1-1:1