Transcript: lnc-OR9A2-3:1

Basic information

LNCipedia transcript ID: lnc-OR9A2-3:1 
LNCipedia gene ID: lnc-OR9A2-3
Location (hg19): chr7:142786899-142788258
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1204 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3494_chr7:142786898-142788193_placenta
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.9166 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR9A2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR9A2-3:1
4.0 lnc-OR9A2-3:1
4.1 lnc-OR9A2-3:1
5.0 lnc-OR9A2-3:1
5.1 lnc-PRSS58-9:1
5.2 lnc-OR9A2-3:1