Transcript: lnc-ORAOV1-3:4

Basic information

LNCipedia transcript ID: lnc-ORAOV1-3:4 
LNCipedia gene ID: lnc-ORAOV1-3
Location (hg19): chr11:69234576-69259734
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5125 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255606.1|MICT00000062689.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -30.7283 non-coding 
CPAT coding probability 21.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ORAOV1-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ORAOV1-3:4
5.0 lnc-ORAOV1-3:4
5.1 lnc-KMT5B-22:2
5.2 lnc-ORAOV1-3:4