Transcript: lnc-ORMDL2-1:23

Basic information

LNCipedia transcript ID: lnc-ORMDL2-1:23 
LNCipedia gene ID: lnc-ORMDL2-1
Location (hg19): chr12:56228574-56230036
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1375 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT028706
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.9356 non-coding 
CPAT coding probability 19.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ORMDL2-1:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ORMDL2-1:23
4.0 lnc-ORMDL2-1:23
4.1 lnc-ORMDL2-1:23
5.0 lnc-ORMDL2-1:23
5.1 lnc-BLOC1S1-4:23
5.2 lnc-ORMDL2-1:23