Transcript: lnc-ORMDL2-1:7

Basic information

LNCipedia transcript ID: lnc-ORMDL2-1:7 
LNCipedia gene ID: lnc-ORMDL2-1
Location (hg19): chr12:56224156-56230064
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2204 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT028693
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 176.1775 coding 
CPAT coding probability 70.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ORMDL2-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ORMDL2-1:7
4.0 lnc-ORMDL2-1:7
4.1 lnc-ORMDL2-1:7
5.0 lnc-ORMDL2-1:7
5.1 lnc-BLOC1S1-4:7
5.2 lnc-ORMDL2-1:7