Transcript: lnc-ORMDL3-3:1

Basic information

LNCipedia transcript ID: lnc-ORMDL3-3:1 
LNCipedia gene ID: lnc-ORMDL3-3
Location (hg19): chr17:38108120-38109045
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 926 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000033613.1|ENCT00000183395.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -70.9002 non-coding 
CPAT coding probability 10.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ORMDL3-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ORMDL3-3:1
5.0 lnc-ORMDL3-3:1
5.1 lnc-MED24-3:3
5.2 lnc-ORMDL3-3:1