Transcript: lnc-OTOGL-4:1

Basic information

LNCipedia transcript ID: lnc-OTOGL-4:1 
LNCipedia gene ID: lnc-OTOGL-4
Location (hg19): chr12:79681064-79688623
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1256 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001szh_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -170.8145 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OTOGL-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OTOGL-4:1
4.0 lnc-OTOGL-4:1
4.1 lnc-OTOGL-4:1
5.0 lnc-OTOGL-4:1
5.1 lnc-METTL25-10:1
5.2 lnc-OTOGL-4:1