Transcript: lnc-OXLD1-3:1

Basic information

LNCipedia transcript ID: lnc-OXLD1-3:1 
LNCipedia gene ID: lnc-OXLD1-3
Location (hg19): chr17:79648217-79650811
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2343 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT056539
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 828.1581 coding 
CPAT coding probability 49.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-OXLD1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARL16-2:1
4.0 lnc-ARL16-2:1
4.1 lnc-ARL16-2:1
5.0 lnc-ARL16-2:1
5.1 lnc-NPLOC4-3:1
5.2 lnc-OXLD1-3:1