Transcript: lnc-P2RX7-1:2

Basic information

LNCipedia transcript ID: lnc-P2RX7-1:2 
LNCipedia gene ID: lnc-P2RX7-1
Location (hg19): chr12:121625359-121625835
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 477 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000569999.1; RP11-340F14.5-001; OTTHUMT00000421356.1; NONHSAT031416
Alternative gene names: ENSG00000261827.1; RP11-340F14.5; OTTHUMG00000172919.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -241.9407 non-coding 
CPAT coding probability 3.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-P2RX7-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-P2RX7-1:2
4.0 lnc-P2RX7-1:2
4.1 lnc-P2RX7-1:2
5.0 lnc-P2RX7-1:2
5.1 lnc-PSMD9-31:3
5.2 lnc-P2RX7-1:2