Transcript: lnc-P3H4-1:2

Basic information

LNCipedia transcript ID: lnc-P3H4-1:2 
LNCipedia gene ID: lnc-P3H4-1
Location (hg19): chr17:39990452-39992292
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1841 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ncRnaDb_ncrna_FR357736_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 98.0918 coding 
CPAT coding probability 55.73% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-P3H4-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LEPREL4-1:4
4.0 lnc-LEPREL4-1:4
4.1 lnc-LEPREL4-1:4
5.0 lnc-LEPREL4-1:4
5.1 lnc-BRCA1-49:2
5.2 lnc-P3H4-1:2