Transcript: lnc-PABPC4-1:10

Basic information

LNCipedia transcript ID: lnc-PABPC4-1:10 
LNCipedia gene ID: lnc-PABPC4-1
Location (hg19): chr1:39987956-40013743
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1072 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT139862
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -144.5579 non-coding 
CPAT coding probability 37.83% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PABPC4-1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PABPC4-1:10
4.0 lnc-PABPC4-1:10
4.1 lnc-PABPC4-1:10
5.0 lnc-PABPC4-1:10
5.1 lnc-PABPC4-1:10
5.2 lnc-PABPC4-1:10