Transcript: lnc-PABPC4-4:6

Basic information

LNCipedia transcript ID: lnc-PABPC4-4:6 
LNCipedia gene ID: lnc-PABPC4-4
Location (hg19): chr1:40026488-40029710
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2257 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT002582
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1217.2221 coding 
CPAT coding probability 76.38% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PABPC4-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PABPC4-4:6
4.0 lnc-PABPC4-4:6
4.1 lnc-PABPC4-4:6
5.0 lnc-PABPC4-4:6
5.1 lnc-PABPC4-4:6
5.2 lnc-PABPC4-4:6