Transcript: lnc-PABPC4L-6:2

Basic information

LNCipedia transcript ID: lnc-PABPC4L-6:2 
LNCipedia gene ID: lnc-PABPC4L-6
Location (hg19): chr4:134178445-134184190
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1266 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000507172; NONHSAT098349
Alternative gene names: ENSG00000248119; AC108052.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 33.3004 non-coding 
CPAT coding probability 4.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PABPC4L-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-62N21.1.1-6:2
3.1 lnc-RP11-62N21.1.1-6:2
4.0 lnc-RP11-62N21.1.1-6:2
4.1 lnc-RP11-62N21.1.1-6:2
5.0 lnc-RP11-62N21.1.1-6:2
5.1 lnc-CLGN-59:2
5.2 lnc-PABPC4L-6:2