Transcript: lnc-PACRGL-6:1

Basic information

LNCipedia transcript ID: lnc-PACRGL-6:1 
LNCipedia gene ID: lnc-PACRGL-6
Ensembl Gene ID: ENSG00000272995
Ensembl Transcript ID: ENST00000610199
Location (hg19): chr4:20768431-20768995
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 565 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610199.1
Alternative gene names: ENSG00000272995.1; RP11-362J17.1; AC097505.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -152.0691 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PACRGL-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PACRGL-6:1
4.0 lnc-PACRGL-6:1
4.1 lnc-PACRGL-6:1
5.0 lnc-PACRGL-6:1
5.1 lnc-USP17L28-76:1
5.2 lnc-PACRGL-6:1