Transcript: lnc-PAICS-3:3

Basic information

LNCipedia transcript ID: lnc-PAICS-3:3 
LNCipedia gene ID: lnc-PAICS-3
Location (hg19): chr4:57253389-57256096
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2708 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269921.1|FTMT21600003348.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -34.6643 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAICS-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PAICS-3:3
5.0 lnc-PAICS-3:3
5.1 lnc-CEP135-9:1
5.2 lnc-PAICS-3:3