Transcript: lnc-PANK3-14:1

Basic information

LNCipedia transcript ID: lnc-PANK3-14:1 
LNCipedia gene ID: lnc-PANK3-14
Location (hg19): chr5:168110971-168123316
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 594 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT105000
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -151.2548 non-coding 
CPAT coding probability 81.96% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PANK3-14:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PANK3-14:1
4.0 lnc-PANK3-14:1
4.1 lnc-PANK3-14:1
5.0 lnc-PANK3-14:1
5.1 lnc-PDLIM7-121:1
5.2 lnc-PANK3-14:1