Transcript: lnc-PAPD5-1:1

Basic information

LNCipedia transcript ID: lnc-PAPD5-1:1 
LNCipedia gene ID: lnc-PAPD5-1
Location (hg19): chr16:50139752-50140295
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 544 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT142400
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.9866 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAPD5-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAPD5-1:1
4.0 lnc-PAPD5-1:1
4.1 lnc-PAPD5-1:1
5.0 lnc-PAPD5-1:1
5.1 lnc-ADGRG1-145:1
5.2 lnc-PAPD5-1:1