Transcript: lnc-PAPPA2-4:3

Basic information

LNCipedia transcript ID: lnc-PAPPA2-4:3 
LNCipedia gene ID: lnc-PAPPA2-4
Location (hg19): chr1:176522624-176524872
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 580 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT007782
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.5303 non-coding 
CPAT coding probability 3.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAPPA2-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAPPA2-4:3
4.0 lnc-PAPPA2-4:3
4.1 lnc-PAPPA2-4:3
5.0 lnc-PAPPA2-4:3
5.1 lnc-SOAT1-24:3
5.2 lnc-PAPPA2-4:3