Transcript: lnc-PAQR9-2:2

Basic information

LNCipedia transcript ID: lnc-PAQR9-2:2 
LNCipedia gene ID: lnc-PAQR9-2
RefSeq ID: NR_034032
Location (hg19): chr3:142719687-142720309
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 623 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT092514; NR_034032; NR_034032.1
Alternative gene names: LOC100289361


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -262.8651 non-coding 
CPAT coding probability 3.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAQR9-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAQR9-2:2
4.0 lnc-PAQR9-2:2
4.1 lnc-PAQR9-2:2
5.0 lnc-PAQR9-2:2
5.1 lnc-GK5-13:1
5.2 lnc-PAQR9-2:2