Transcript: lnc-PARK7-6:1

Basic information

LNCipedia transcript ID: lnc-PARK7-6:1 
LNCipedia gene ID: lnc-PARK7-6
Location (hg19): chr1:8121564-8122634
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1071 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000006780.1|ENCT00000001005.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -162.5841 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PARK7-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PARK7-6:1
5.0 lnc-PARK7-6:1
5.1 lnc-VAMP3-9:1
5.2 lnc-PARK7-6:1