Transcript: lnc-PARP10-1:4

Basic information

LNCipedia transcript ID: lnc-PARP10-1:4 
LNCipedia gene ID: lnc-PARP10-1
Location (hg19): chr8:145108116-145109782
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 500 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000531027.1; OPLAH-004; OTTHUMT00000384063.1
Alternative gene names: ENSG00000178814.11; OPLAH; OTTHUMG00000165435.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1140.8287 non-coding 
CPAT coding probability 60.90% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PARP10-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARP10-1:4
4.0 lnc-PARP10-1:4
4.1 lnc-PARP10-1:4
5.0 lnc-PARP10-1:4
5.1 lnc-TMEM249-28:1
5.2 lnc-PARP10-1:4