Transcript: lnc-PARP11-3:1

Basic information

LNCipedia transcript ID: lnc-PARP11-3:1 
LNCipedia gene ID: lnc-PARP11-3
Location (hg19): chr12:4071057-4106135
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 359 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020679; NONHSAT025936
Alternative gene names: XLOC_009984; linc-PARP11-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -105.6762 non-coding 
CPAT coding probability 4.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PARP11-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PARP11-3:1
3.1 lnc-PARP11-3:1
4.0 lnc-PARP11-3:1
4.1 lnc-PARP11-3:1
5.0 lnc-PARP11-3:1
5.1 lnc-CHD4-80:6
5.2 lnc-PARP11-3:1