Transcript: lnc-PARVG-1:2

Basic information

LNCipedia transcript ID: lnc-PARVG-1:2 
LNCipedia gene ID: lnc-PARVG-1
Location (hg19): chr22:44736116-44740506
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 235 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029613; NONHSAT087152
Alternative gene names: XLOC_014264; linc-PRR5-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 2.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PARVG-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP1-32I10.10.1-1:1
3.1 lnc-RP1-32I10.10.1-1:1
4.0 lnc-RP1-32I10.10.1-1:1
4.1 lnc-RP1-32I10.10.1-1:1
5.0 lnc-RP1-32I10.10.1-1:1
5.1 lnc-FBLN1-26:1
5.2 lnc-PARVG-1:2