Transcript: lnc-PARVG-6:1

Basic information

LNCipedia transcript ID: lnc-PARVG-6:1 
LNCipedia gene ID: lnc-PARVG-6
Ensembl Gene ID: ENSG00000220702
Ensembl Transcript ID: ENST00000406912
Location (hg19): chr22:44761431-44762164
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 606 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000406912.1
Alternative gene names: ENSG00000220702.1; RP1-32I10.10; Z85994.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.7059 non-coding 
CPAT coding probability 3.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PARVG-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP1-32I10.10.1-6:1
4.1 lnc-RP1-32I10.10.1-6:1
5.0 lnc-RP1-32I10.10.1-6:1
5.1 lnc-FBLN1-25:1
5.2 lnc-PARVG-6:1