Transcript: lnc-PASK-2:3

Basic information

LNCipedia transcript ID: lnc-PASK-2:3 
LNCipedia gene ID: lnc-PASK-2
Location (hg19): chr2:242187664-242190411
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1070 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT077903
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -256.4145 non-coding 
CPAT coding probability 6.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PASK-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PASK-2:3
4.0 lnc-PASK-2:3
4.1 lnc-PASK-2:3
5.0 lnc-PASK-2:3
5.1 lnc-STK25-10:3
5.2 lnc-PASK-2:3