Transcript: lnc-PATL2-8:2

Basic information

LNCipedia transcript ID: lnc-PATL2-8:2 
LNCipedia gene ID: lnc-PATL2-8
Location (hg19): chr15:45070288-45076534
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5127 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000024799.1|MICT00000115806.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.2443 non-coding 
CPAT coding probability 3.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PATL2-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PATL2-8:2
5.0 lnc-PATL2-8:2
5.1 lnc-SERINC4-19:1
5.2 lnc-PATL2-8:2