Transcript: lnc-PAWR-13:1

Basic information

LNCipedia transcript ID: lnc-PAWR-13:1 
LNCipedia gene ID: lnc-PAWR-13
Location (hg19): chr12:79607518-79625128
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2950 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_684_chr12:79607517-79625128_thyroid
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.3527 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAWR-13:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAWR-13:1
4.0 lnc-PAWR-13:1
4.1 lnc-PAWR-13:1
5.0 lnc-PAWR-13:1
5.1 lnc-CCDC59-30:1
5.2 lnc-PAWR-13:1