Transcript: lnc-PAX5-3:3

Basic information

LNCipedia transcript ID: lnc-PAX5-3:3 
LNCipedia gene ID: lnc-PAX5-3
Location (hg19): chr9:37113082-37120158
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 537 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000108336.1|FTMT23300025790.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -201.0277 non-coding 
CPAT coding probability 0.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAX5-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PAX5-3:3
5.0 lnc-PAX5-3:3
5.1 lnc-FBXO10-9:1
5.2 lnc-PAX5-3:3