Transcript: lnc-PAX9-11:1

Basic information

LNCipedia transcript ID: lnc-PAX9-11:1 
LNCipedia gene ID: lnc-PAX9-11
Location (hg19): chr14:36789972-36895059
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 378 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258844.1|HBMT00000427634.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -193.8542 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAX9-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PAX9-11:1
5.0 lnc-PAX9-11:1
5.1 lnc-BRMS1L-27:3
5.2 lnc-PAX9-11:1