Transcript: lnc-PAX9-11:6

Basic information

LNCipedia transcript ID: lnc-PAX9-11:6 
LNCipedia gene ID: lnc-PAX9-11
Location (hg19): chr14:37125439-37126057
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 272 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022475; NONHSAT036444
Alternative gene names: XLOC_010803; linc-PAX9-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.7001 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAX9-11:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PAX9-1:1
3.1 lnc-PAX9-1:1
4.0 lnc-PAX9-1:1
4.1 lnc-PAX9-1:1
5.0 lnc-PAX9-1:1
5.1 lnc-BRMS1L-27:6
5.2 lnc-PAX9-11:6