Transcript: lnc-PAXIP1-23:5

Basic information

LNCipedia transcript ID: lnc-PAXIP1-23:5 
LNCipedia gene ID: lnc-PAXIP1-23
Location (hg19): chr7:154999560-155000123
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 447 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014013; NONHSAT124349
Alternative gene names: XLOC_006661; linc-PAXIP1-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAXIP1-23:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC099552.4.1-1:3
3.1 lnc-AC099552.4.1-1:3
4.0 lnc-AC099552.4.1-1:3
4.1 lnc-AC099552.4.1-1:3
5.0 lnc-AC099552.4.1-1:3
5.1 lnc-PAXIP1-12:5
5.2 lnc-PAXIP1-23:5