Transcript: lnc-PCDH9-9:1

Basic information

LNCipedia transcript ID: lnc-PCDH9-9:1 
LNCipedia gene ID: lnc-PCDH9-9
Location (hg19): chr13:65883987-65885085
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 869 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT034193
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 83.9204 coding 
CPAT coding probability 81.08% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PCDH9-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCDH9-9:1
4.0 lnc-PCDH9-9:1
4.1 lnc-PCDH9-9:1
5.0 lnc-PCDH9-9:1
5.1 lnc-CCDC169-244:1
5.2 lnc-PCDH9-9:1