Transcript: lnc-PCNX2-5:1

Basic information

LNCipedia transcript ID: lnc-PCNX2-5:1 
LNCipedia gene ID: lnc-PCNX2-5
Location (hg19): chr1:232919075-232921812
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 257 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_215_chr1:232919074-232921812_liver
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 4.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCNX2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCNXL2-5:1
4.0 lnc-PCNXL2-5:1
4.1 lnc-PCNXL2-5:1
5.0 lnc-PCNXL2-5:1
5.1 lnc-SIPA1L2-15:1
5.2 lnc-PCNX2-5:1