Transcript: lnc-PCSK6-1:7

Basic information

LNCipedia transcript ID: lnc-PCSK6-1:7 
LNCipedia gene ID: lnc-PCSK6-1
Location (hg19): chr15:101844136-101849317
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3325 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT051173
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 573.9088 coding 
CPAT coding probability 24.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PCSK6-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNRPA1-1:5
4.0 lnc-PCSK6-1:7
4.1 lnc-PCSK6-1:7
5.0 lnc-PCSK6-1:7
5.1 lnc-CIB1-119:5
5.2 lnc-PCSK6-1:7