Transcript: lnc-PCSK6-3:2

Basic information

LNCipedia transcript ID: lnc-PCSK6-3:2 
LNCipedia gene ID: lnc-PCSK6-3
Location (hg19): chr15:102062800-102068552
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2451 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT051187
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -52.3697 non-coding 
CPAT coding probability 14.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCSK6-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCSK6-1:2
4.0 lnc-PCSK6-3:2
4.1 lnc-PCSK6-3:2
5.0 lnc-PCSK6-3:2
5.1 lnc-CIB1-120:2
5.2 lnc-PCSK6-3:2