Transcript: lnc-PCSK6-3:4

Basic information

LNCipedia transcript ID: lnc-PCSK6-3:4 
LNCipedia gene ID: lnc-PCSK6-3
Ensembl Gene ID: ENSG00000277210
Ensembl Transcript ID: ENST00000610780
Location (hg19): chr15:102062800-102064942
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2143 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610780.3
Alternative gene names: ENSG00000277210.3; RP11-14C10.6; AC090164.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -52.3697 non-coding 
CPAT coding probability 14.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCSK6-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PCSK6-3:4
4.1 lnc-PCSK6-3:4
5.0 lnc-PCSK6-3:4
5.1 lnc-CIB1-120:4
5.2 lnc-PCSK6-3:4