Transcript: lnc-PDCD11-2:2

Basic information

LNCipedia transcript ID: lnc-PDCD11-2:2 
LNCipedia gene ID: lnc-PDCD11-2
Location (hg19): chr10:105308821-105310721
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 535 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226431.1|ENST00000457120.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -144.2786 non-coding 
CPAT coding probability 1.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDCD11-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PDCD11-2:2
5.0 lnc-PDCD11-2:2
5.1 lnc-SMC3-75:1
5.2 lnc-PDCD11-2:2