Transcript: lnc-PDE3B-1:1

Basic information

LNCipedia transcript ID: lnc-PDE3B-1:1 
LNCipedia gene ID: lnc-PDE3B-1
Location (hg19): chr11:14934959-14969520
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 214 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019241; NONHSAT018144
Alternative gene names: XLOC_009072; linc-CALCB-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.7382 non-coding 
CPAT coding probability 2.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDE3B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PDE3B-1:1
3.1 lnc-PDE3B-1:1
4.0 lnc-PDE3B-1:1
4.1 lnc-PDE3B-1:1
5.0 lnc-PDE3B-1:1
5.1 lnc-NUCB2-22:1
5.2 lnc-PDE3B-1:1