Transcript: lnc-PDE4A-4:1

Basic information

LNCipedia transcript ID: lnc-PDE4A-4:1 
LNCipedia gene ID: lnc-PDE4A-4
Location (hg19): chr19:10514357-10515439
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1083 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000038520.1|FTMT27600000478.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -91.5742 non-coding 
CPAT coding probability 16.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDE4A-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PDE4A-4:1
5.0 lnc-PDE4A-4:1
5.1 lnc-P2RY11-10:1
5.2 lnc-PDE4A-4:1