Transcript: lnc-PDE6B-1:16

Basic information

LNCipedia transcript ID: lnc-PDE6B-1:16 
LNCipedia gene ID: lnc-PDE6B-1
Location (hg19): chr4:575944-582652
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1330 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT094578
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.0174 non-coding 
CPAT coding probability 21.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDE6B-1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PDE6B-1:16
4.0 lnc-PDE6B-1:16
4.1 lnc-PDE6B-1:16
5.0 lnc-PDE6B-1:16
5.1 lnc-GPR78-137:20
5.2 lnc-PDE6B-1:16