Transcript: lnc-PDE6B-1:20

Basic information

LNCipedia transcript ID: lnc-PDE6B-1:20 
LNCipedia gene ID: lnc-PDE6B-1
Location (hg19): chr4:570296-572439
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1325 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000263386.1|FTMT21500028738.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -45.6321 non-coding 
CPAT coding probability 2.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PDE6B-1:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PDE6B-1:20
5.0 lnc-PDE6B-1:20
5.1 lnc-GPR78-137:3
5.2 lnc-PDE6B-1:20